LIF
Doctoral Researcher Position (m/f/div) in Metagenomics
✓ Funded (Competition)
⏰ Closing Soon
🎓 Bioengineering
🎓 Bioinformatics
🎓 Biological Sciences
🎓 Chemical Engineering
🎓 Microbiology
🎓 Systematic Biology
phd
Germany
Leibniz-HKI
bioinformatics
computational biology
gut microbiome
metagenomics
microbiome
multi-omics
systems biology
Four-year PhD at Leibniz-HKI in Jena, Germany, investigating computational microbiome research and multi-omics integration to study gut bacteria’s systemic impact on human health.
Project Description
At the Leibniz Institute for Natural Product Research and Infection Biology (Leibniz-HKI), we investigate microorganism pathobiology and develop new natural-product-based compounds for infectious diseases. The Microbiome Dynamics (MBD) department focuses on computational methods for personalized microbiome strategies in detection, monitoring, treatment, and prevention of human diseases.
The PhD project will be tailored to the candidate’s skills and interests and align with consortia including MiCCrobioTAckle, PerMiCCion, FOODGUARD, NUTRIMMUNE, Balance of the Microverse, and SynThera. The project involves computational integration of multi-omics datasets from microbial communities and hosts, studying the role of gut bacteria in cancer, metabolic disorders, aging, infections, and other conditions.
Candidates will work in an interdisciplinary international environment, collaborating with scientists and using state-of-the-art computational infrastructure. The position fosters academic excellence and societal impact in a collegial and inclusive setting.
Entry Requirements
Strong interest in collaborative microbiome research
Interest in working across multiple research domains
Master’s degree in computational biology, bioinformatics, systems biology, bioengineering, chemical engineering, or related field
Experience with metagenomics, untargeted metabolomics, or high-throughput biological data
Knowledge of statistical methods for biological systems
Programming experience (Python, Perl, C++, R)
Well-developed collaborative skills
Interest in working across multiple research domains
Master’s degree in computational biology, bioinformatics, systems biology, bioengineering, chemical engineering, or related field
Experience with metagenomics, untargeted metabolomics, or high-throughput biological data
Knowledge of statistical methods for biological systems
Programming experience (Python, Perl, C++, R)
Well-developed collaborative skills
How to Apply
Submit a complete application in English via the Leibniz-HKI online application system, including:
Cover letter
CV with full list of publications
Brief statement of research experience
Certificate of study / transcript of records
Addresses of two referees
Applications are reviewed on a rolling basis; the advertisement deadline is 30 April 2026.
Contact:
Prof. Dr. Gianni Panagiotou | +49 3641 532-1759
Cover letter
CV with full list of publications
Brief statement of research experience
Certificate of study / transcript of records
Addresses of two referees
Applications are reviewed on a rolling basis; the advertisement deadline is 30 April 2026.
Contact:
Prof. Dr. Gianni Panagiotou | +49 3641 532-1759
Eligibility
UK/Home
EU
International
Supervisor Profile
PG
Prof Gianni Panagiotou
Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute
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